Overview of research projects

Funding: Europäische Innovationspartnerschaft "Produktivität und Nachhaltigkeit in der Landwirtschaft" (EIP Agri) über Kompetenzzentrum Ökolandbau Nds. GmbH, 101.364 EUR

Project Details:
Turkey farming plays an essential role in the production of poultry meat in Germany. The animals are mainly kept on very specialised farms, as the animals make high demands on feed and management. The aim of this project is to cross a robust turkey from genetics and old breeds available on the market. The animals should be healthy, hardy and suitable for keeping under extensive conditions, e.g. also on mixed farms. An essential aspect for the development of the animals is the rearing. In the rearing of turkey chicks, it is currently common practice to incubate eggs artificially. After hatching, the chicks are usually kept in larger groups without the presence of an adult animal or a mother hen. In this project, the conventional hand rearing will be compared with a mother-led rearing, in particular the behaviour of the animals will be investigated with regard to stress resistance, activity, foraging behaviour, fearfulness and social behaviour.

Cooperation Partners:

Kompetenzzentrum Ökolandbau Niedersachsen GmbH, Putenzucht Klein Süstedt i. G., Farmpark-Consult, Bauckhof Fleischmanufaktur GmbH, Öko-Beratungsgesellschaft mbH - Naturland Fachberatung, Bäuerliche Gesellschaft - Demeter im Norden e. V., Ulrike Hoffmeister & Dorothee Hoenig GbR, Praxisbetriebe

Funding: Landwirtschaftliche Rentenbank, 234.673 EUR

Project Details:
The aim of this project is to develop a concept that enables the implementation of general and specific hygiene measures in mobile houses for laying hens. This concept should take into account both the current epidemic hygiene regulations and animal and environmental protection.

Cooperation Partners:

Hochschule Osnabrück

Weiland Stallbau GmbH & Co. KG

Landwirtschaftskammer Niedersachsen

Landwirtschaftskammer Nordrhein-Westfalen

Funding: DFG, 449.000 EUR

Project Details:
In this research project, the effects of Ascaris suum infections in pigs on the intestinal transport of nutrients will be investigated. This will be achieved by in vitro measurements on intact epithelium via the electrophysiological response after mucosal addition of nutrients, via flux studies using radiolabelled substrates and via uptake studies in membrane vesicles of the luminal and basolateral membrane of enterocytes. These functional studies are complemented by molecular biology studies on the expression of the transport systems (quantitative RT-PCR, Western blot and immunohistochemistry).

Results:

Koehler, S., Springer, A., Issel, N., Klinger, S., Wendt, M., Breves, G., Strube, C. (2023) Effects of adult Ascaris suum and their antigens (total and trans-cuticular excretory-secretory antigen, cuticular somatic antigen) on intestinal nutrient transport in vivo. Parasitology 150, 78-87

 

Koehler, S., Springer, A., Issel, N., Klinger, S., Wendt, M., Breves, G., Strube, C. (2021) Ascaris suum nutrient uptake and metabolic release, and modulation of host intestinal nutrient transport by excretory-secretory and cuticle antigens in vitro. Pathogens 10, 1419

 

Koehler, S., Springer, A., Issel, N., Klinger, S., Strube, C., Breves, G. (2021) Changes in porcine nutrient transport physiology in response to Ascaris suum infection. Parasite & Vectors 14, 533

Funding: Alexander von Humboldt Stiftung AvH, 5.000.000 EUR

Project Details:
Immunvirologische Forschung

Funding: Deutsche Forschungsgemeinschaft (DFG), 199.450 EUR

Project Details:
Der Respirationstrakt ist eine häufige Eintrittspforte für Krankheitserreger. Das Hundestaupevirus (CDV) sowie das nahverwandte Masernvirus müssen die Barriere des Atemwegsepithels überwinden, um zu ihren Zielzellen, den Immunzellen, zu gelangen. Nectin-4, der einzige bekannte Rezeptor für beide Viren auf Epithelzellen, ist ein basolaterales Protein. Nach Aufnahme werden die Morbilliviren von polarisierten Zellen des respiratorischen Epithels über die apikale Membran freigesetzt, gelangen in die Luftwege und können so den Wirt verlassen. Es ist bislang nicht bekannt wie das CDV im Anfangsstadium der Infektion die Barriere des Atemwegsepithels überwindet und in den Wirt eindringt. In dem geplanten Projekt soll daher mittels Präzisionslungenschnitten und Air-liquid-interface-Kulturen differenzierter respiratorischer Zellen analysiert werden, wie CDV das respiratorische Epithel überwindet und subepitheliale Zielzellen infiziert. Hierbei werden die infizierten Zelltypen, der Infektionsverlauf, zytopathogene Effekte und die Regeneration des Epithels in beiden Kultursystemen näher charakterisiert. Der Einsatz von CDV-Mutanten, die Defekte in der Rezeptorerkennung aufweisen (SLAM-blinde und Epithelzell-Rezeptor-blinde CDV), ermöglicht hierbei gezielte Aussagen über das Spektrum der infizierbaren Zellen und die Effizienz der Infektion. Als zweite Möglichkeit des Überwindens der Epithelbarriere wird untersucht, ob CDV über die parazelluläre Route eindringen kann. Außerdem wird der Einfluss verschiedener Umweltfaktoren, von denen bekannt ist, dass sie die Verbindung zwischen Epithelzellen (tight junctions) öffnen, auf den Infektionsverlauf ermittelt. Zusätzlich soll geklärt werden, ob infizierte Makrophagen oder dendritische Zellen bei der Überwindung der Epithelzellbarriere als Vektoren fungieren und so bei der Ausbreitung der Infektion behilflich sind. In weiteren in vitro-Experimenten wird mittels Zytokinexpressionsanalysen bestimmt, welche Auswirkung die CDV-Infektion auf immunologische Funktionen in der Lunge hat. Im Rahmen der CDV-Infektion des Atemwegepithels soll außerdem der Einfluss einer Co-Infektion (Bordetella bronchiseptica) untersucht werden. Das Projekt wird entscheidend für das Verständnis der Pathogenese der CDV-Infektion beitragen. Es wird auch hilfreich sein für das Verständnis anderer Viren, die den Respirationstrakt als Durchgangsstation benutzen, um in ihren Wirt einzudringen.

Funding: QOL Med LLC,Vero Beach, Florida, USA; Unrestricted Research Grant , 230.000 EUR

Project Details:
Current concepts of genetically-determined carbohydrate malabsorption have implicated homozygous and compound heterozygous mutations in the gene encoding SI as the molecular basis for the onset of this intestinal disorder (Naim et al., J Pediatr Gastroenterol Nutr. 2012 Nov;55 Suppl 2:S13-20. review). The major pathogenic variants in CSID are: V577G in the isomaltase subunit and G1073D, F1745C and R1124X in the sucrase subunit, whereby the G1073D is the mutation with the highest prevalence among CSID patients. We have recently suggested that the symptoms and clinical phenotype in CSID follow a gradient of severity that is directly associated with the cellular trafficking patterns of SI mutants between the ER, Golgi and cell surface (Gericke et al., Biochim Biophys Acta. 2017 Mar;1863(3):817-826). Interestingly, some of the mutations analysed occur as heterozygotes in these patients. Along similar lines is the finding that 5 out of 11 patients in our study by Sander et al. (Hum Mutat. 2006 Jan;27(1):119.) occur as heterozygotes towards mutations of the SI gene and harbor mutations such as G1073D, F1745C and T694P.

Funding: DFG, 215.000 EUR

Project Details:
The early steps of hepatitis C virus (HCV) cell entry involve a complex interplay between the incoming virion and host cell expressed factors. Key host factors in the early phase of HCV cell entry include scavenger receptor class B member 1 (SR-BI), low-density lipoprotein receptor (LDLR) and CD81. Work from the previous funding period has revealed how genetic variation in one host factor, the high-density lipoprotein (HDL) receptor SR-BI, can modulate HCV infection, while highlighting at the same time that to fully understand the mechanisms of early HCV-cell interactions a broader view of the host cell molecules involved is required. In particular, others and we demonstrated that HCV host factors interact with each other and with cholesterol and this critically determines susceptibility. Moreover, we have identified CD81-binding partners calpain-5 (CAPN5) and casitas B-lineage lymphoma proto-oncogene b (CBLB) as novel modulators of HCV entry.
The proposed project for the next funding period has the overarching goal to better characterize how the host factors involved in the early phase of HCV entry interact with the virus and each other, and how these interactions are modulated by genetic and pharmacological factors. The project has four parts: (1) We will evaluate coding SR-BI and CD81 variants in a LDLR/SR-BI negative or - respectively - CD81 negative context for their effect on the HCV replication cycle and especially the early phase of cell entry in vitro. (2) We will determine how selected CD81 variants influence the interaction between CD81 and SR-BI and to what extent this mechanistically explains cell entry phenotypes. Here we will cooperate with project A6 (Pietschmann) which focusesl conversely on variation in SR-BI and membrane cholesterol content. (3) We will investigate how statins and other lipid lowering drugs including the new and highly potent monoclonal antibodies directed at proprotein convertase subtilisin/kexin type 9 (PCSK9), a key regulator of LDLR subcellular localization and function, impact HCV infection. Specifically, we will address the impact on the expression level of SR-BI, LDLR and CD81 and on membrane and cellular cholesterol content of hepatocytes as well as the impact of statin therapy on viral load and hepatic inflammation in patients with chronic hepatitis C. (4) Finally, we will extend our analysis to newly identified CD81 interaction partners CAPN5 and CBLB and their role in HCV cell entry and receptor complex regulation beginning with the generation of human variants to probe whether they impact CD81 and SR-BI interactions as well as HCV infection. Taken together, this work holds the promise of a deeper understanding of the mechanistic role of established and newly discovered HCV entry factors during the early phase of HCV cell entry, its modulation by host genetic variants and non-genetic host factors such as exposure to lipid metabolism-modulating drugs and thus of interindividual variability in the course of chronic hepatitis C.

Cooperation Partners:

Prof. Dr. Thomas von Hahn

Klinik für Gastroenterologie, Hepatologie und Endokrinologie und Institut für Molekularbiologie - Medizinische Hochschule Hannover

Funding: DFG Sonderforschungsbereich 900 "Mirkobielle Persistenz und seine Kontrolle", 215.000 EUR

Project Details:
The early steps of hepatitis C virus (HCV) cell entry involve a complex interplay between the incoming virion and host cell expressed factors. Key host factors in the early phase of HCV cell entry include scavenger receptor class B member 1 (SR-BI), low-density lipoprotein receptor (LDLR) and CD81. Work from the previous funding period has revealed how genetic variation in one host factor, the high-density lipoprotein (HDL) receptor SR-BI, can modulate HCV infection, while highlighting at the same time that to fully understand the mechanisms of early HCV-cell interactions a broader view of the host cell molecules involved is required. In particular, others and we demonstrated that HCV host factors interact with each other and with cholesterol and this critically determines susceptibility. Moreover, we have identified CD81-binding partners calpain-5 (CAPN5) and casitas B-lineage lymphoma proto-oncogene b (CBLB) as novel modulators of HCV entry.
The proposed project for the next funding period has the overarching goal to better characterize how the host factors involved in the early phase of HCV entry interact with the virus and each other, and how these interactions are modulated by genetic and pharmacological factors. The project has four parts: (1) We will evaluate coding SR-BI and CD81 variants in a LDLR/SR-BI negative or - respectively - CD81 negative context for their effect on the HCV replication cycle and especially the early phase of cell entry in vitro. (2) We will determine how selected CD81 variants influence the interaction between CD81 and SR-BI and to what extent this mechanistically explains cell entry phenotypes. Here we will cooperate with project A6 (Pietschmann) which focusesl conversely on variation in SR-BI and membrane cholesterol content. (3) We will investigate how statins and other lipid lowering drugs including the new and highly potent monoclonal antibodies directed at proprotein convertase subtilisin/kexin type 9 (PCSK9), a key regulator of LDLR subcellular localization and function, impact HCV infection. Specifically, we will address the impact on the expression level of SR-BI, LDLR and CD81 and on membrane and cellular cholesterol content of hepatocytes as well as the impact of statin therapy on viral load and hepatic inflammation in patients with chronic hepatitis C. (4) Finally, we will extend our analysis to newly identified CD81 interaction partners CAPN5 and CBLB and their role in HCV cell entry and receptor complex regulation beginning with the generation of human variants to probe whether they impact CD81 and SR-BI interactions as well as HCV infection. Taken together, this work holds the promise of a deeper understanding of the mechanistic role of established and newly discovered HCV entry factors during the early phase of HCV cell entry, its modulation by host genetic variants and non-genetic host factors such as exposure to lipid metabolism-modulating drugs and thus of interindividual variability in the course of chronic hepatitis C.

Results:

https://www.sfb900.de/en/

Cooperation Partners:

Prof. Dr. Thomas von Hahn, Klinik für Gastroenterologie, Hepatologie und Endokrinologie und Institut für Molekularbiologie - Medizinische Hochschule Hannover

Funding: DFG Sonderforschungsbereich 900 "Mirkobielle Persistenz und seine Kontrolle", 430.000 EUR

Project Details:
The early steps of hepatitis C virus (HCV) cell entry involve a complex interplay between the incoming virion and host cell expressed factors. Key host factors in the early phase of HCV cell entry include scavenger receptor class B member 1 (SR-BI), low-density lipoprotein receptor (LDLR) and CD81. Work from the pre-vious funding period has revealed how genetic variation in one host factor, the high-density lipoprotein (HDL) receptor SR-BI, can modulate HCV infection, while highlighting at the same time that to fully under-stand the mechanisms of early HCV-cell interactions a broader view of the host cell molecules involved is required. In particular, others and we demonstrated that HCV host factors interact with each other and with cholesterol and this critically determines susceptibility. Moreover, we have identified CD81-binding partners calpain-5 (CAPN5) and casitas B-lineage lymphoma proto-oncogene b (CBLB) as novel modulators of HCV entry.
The proposed project for the next funding period has the overarching goal to better characterize how the host factors involved in the early phase of HCV entry interact with the virus and each other, and how these interactions are modulated by genetic and pharmacological factors. The project has four parts: (1) We will evaluate coding SR-BI and CD81 variants in a LDLR/SR-BI negative or - respectively - CD81 negative con-text for their effect on the HCV replication cycle and especially the early phase of cell entry in vitro. (2) We will determine how selected CD81 variants influence the interaction between CD81 and SR-BI and to what extent this mechanistically explains cell entry phenotypes. Here we will cooperate with project A6 (Pietsch-mann) which focusesl conversely on variation in SR-BI and membrane cholesterol content. (3) We will inves-tigate how statins and other lipid lowering drugs including the new and highly potent monoclonal antibodies directed at proprotein convertase subtilisin/kexin type 9 (PCSK9), a key regulator of LDLR subcellular locali-zation and function, impact HCV infection. Specifically, we will address the impact on the expression level of SR-BI, LDLR and CD81 and on membrane and cellular cholesterol content of hepatocytes as well as the impact of statin therapy on viral load and hepatic inflammation in patients with chronic hepatitis C. (4) Final-ly, we will extend our analysis to newly identified CD81 interaction partners CAPN5 and CBLB and their role in HCV cell entry and receptor complex regulation beginning with the generation of human variants to probe whether they impact CD81 and SR-BI interactions as well as HCV infection. Taken together, this work holds the promise of a deeper understanding of the mechanistic role of established and newly discovered HCV entry factors during the early phase of HCV cell entry, its modulation by host genetic variants and non-genetic host factors such as exposure to lipid metabolism-modulating drugs and thus of interindividual variability in the course of chronic hepatitis C.

Funding: Bundesministerium für Ernährung und Landwirtschaft, 682.563 EUR

Project Details:
Unter standardisierten Versuchsbedingungen mit Einzeltierhaltung werden Akzeptanz und Verdaulichkeit sowie Auswirkungen auf die Magen-Darm-Gesundheit junger Mastschweine geprüft, in deren Mischfutter die Komponente Weizen (ca. 70 %) in zunehmenden Anteilen durch Roggen ersetzt wurde. Damit wird eine vergleichende Bewertung der beiden Schwergetreidearten in der Mastschweinefütterung ermöglicht.

Cooperation Partners:

Institut für Tierernährung, Freie Universität Berlin

Institut für Tierernährung, Universität Bonn

KWS LOCHOW GmbH, Bergen/Wohlde