Overview of research projects

Funding: MELUND, 103.127 EUR

Project Details:
Two populations of harbour porpoise occur in the coastal waters of the German Baltic Sea, of which the "Western Belt Sea Population" is significantly larger with an estimated 42,324 individuals (acceptance range: 23,368-76,658), compared to the "Baltic Proper population", which is considered "critically endangered" with an estimated 497 individuals (acceptance range: 80-1,091). Harbour porpoise habitat in the Baltic Sea is intensely impacted by human activities that can have a negative impact on population level. These include shipping, tourist recreational activities, military activities, fishing, offshore construction, explosions of ammunition, chemical and pharmaceutical pollution, and marine debris. In the Baltic Sea in particular, harbour porpoise are threatened by set-net fisheries, to suffer from incidental bycatches. To warn harbour porpoises of set nets, acoustic devices are increasingly being used in the German Baltic Sea. These warning devices (Porpoise Alert = PAL) simulate a communication sound of harbour porpoises. Whether these devices lead to a reduction in bycatch has not yet been conclusively investigated. Effective management measures necessitate a deeper understanding of harbour porpoise habitat use. This is urgently needed, as there is evidence of declines in harbour porpoise populations in Schleswig-Holstein's waters.
The harbour porpoise is listed in Annex II and IV of the Flora-Fauna-Habitat Directives, which obliges EU member states to monitor its conservation status. In this project, the occurrence and habitat use of harbour porpoises in the western part of the Baltic Sea is investigated by means of passive acoustic monitoring. For this purpose, porpoise click detectors (CPODs, Cetacean-Porpoise Detector) were deployed at four positions in March 2021 to record the presence of harbour porpoises. The operated monitoring stations (Holnis, Bredgrund, Schleisand and Damp) cover the area of the Schleswig-Holstein Baltic Sea and are intended to close the gap in the monitoring network between Fehmarn and Denmark.

Results:

Untersuchungen zur Habitatnutzung von Schweinswalen in der westlichen Ostsee mittels passiv-akustischem Monitoring 2021-2023 (PDF, 2MB, Datei ist barrierefrei)

https://www.schleswig-holstein.de/DE/fachinhalte/A/artenschutz/Downloads/untersuchungenHabitatnutzungSchweinswale.pdf?__blob=publicationFile&v=1

Funding: OFB (L?Office Français de la Biodiversité), 400.000 EUR

Project Details:
The European Atlantic is changing rapidly, and it is essential that neighbouring countries have access to up-to-date robust information on the status of key species and populations so that future monitoring and management can be directed effectively and efficiently to achieve and maintain favourable conservation status of species and good environmental status of European Atlantic waters. The "Small Cetaceans in European Atlantic waters and the North Sea (SCANS)" survey is being planned for summer 2022. The objective of SCANS-IV is to estimate the abundance of cetacean species in shelf and oceanic waters of the European Atlantic through a large-scale multinational aerial and shipboard survey in July 2022. This is the most appropriate survey month because of the higher probability of good sighting conditions, and also to ensure that results are comparable with those from SCANS surveys conducted in 1994, 2005/2007 and 2016 (Hammond et al. 2002, 2013, 2021). Thus, this project will represent the fourth survey in the SCANS series. SCANS-IV will deliver regionally coordinated synoptic surveys in shelf and offshore waters of the European Atlantic. It will generate robust abundance estimates for regularly occurring whale and dolphin species and improve power to detect trends in shelf and offshore species. The outputs of the project are timely for EU Member States obligations for reporting under the Marine Strategy Framework Directive (MSFD Article 8: due 2024) and the next reporting round under the Habitats Directive (Article 17: 2019 - 2024) (where applicable) and allow OSPAR/HELCOM assessments. The estimates are also needed for impact assessments of offshore industries and fisheries.
The project will be achieved through the successful completion of six work packages. The first two WPs (WP1 & WP2) focus on collecting data on cetacean abundance and distribution through implementation of aerial surveys on the continental shelf and shipboard surveys in offshore waters. The data will be analysed in WP3 to generate abundance estimates, trends and perform spatio-temporal habitat modelling. WP4 will consider the long-term security of the large-scale cetacean monitoring SCANS programme in the Northeast Atlantic and propose a governance structure to ensure the continuation into the future. WPs 5 & 6 will focus on dissemination of results, project management and reporting.

Results:

Estimates of cetacean abundance in European Atlantic waters in summer 2022 from the SCANS-IV aerial and shipboard surveys. Final report published 29 September 2023. 64 pp.

https://tinyurl.com/3ynt6swa

Cooperation Partners:

Projektkoordination Dr. Anita Gilles, ITAW-Stiftung Tierärztliche Hochschule Hannover

University of St Andrews, United Kingdom

Joint Nature Conservation Committee, United Kingdom

Wageningen Marine Research, Netherlands

Aarhus University, Denmark

Swedish Museum of Natural History, Sweden

La Rochelle University, France

Instituto Español de Oceanografia, Spain

University of Aveiro, CESAM - Centre of Environmental and Marine Studies and Instituto da Conservação da Natureza e das Florestas, Portugal

Funding: Dieses Projekt wird durch die Fritz-Ahrberg-Stiftung gefördert., 40.000 EUR

Project Details:
The topic of this project picks up on the current situation of the COVID-19 pandemic and aims to investigate the safety of food transported in different "take-away"-menu trays during delivery or self-collection. Commercially available menu trays will be considered, and different packaging systems (open, semi-open, and closed) made of different materials will be included in the studies. Since it cannot be guaranteed that the food will be consumed immediately and completely after delivery, different storage temperatures and storage times will also be considered. In this three-stage project, cooked, unbreaded pork and turkey cutlets will be examined first, followed by cutlets contaminated (inoculated) with specific bacterial species and, finally, packaging materials inoculated in the same way. The aim is to gain improved insights into the development of microbial growth in prepared meat in different take-away meal tray systems.

Funding: Fritz-Ahrberg-Stiftung, 100.000 EUR

Project Details:
technique
Summary:
Hepatitis E virus (HEV) is an increasingly common food-associated cause of acute viral hepatitis. To ensure rapid pathogen identification and tracing of the infection sources, rapid and reliable detection methods are crucial. Various approaches are available for the detection of HEV, some of which involve considerable effort, such as cultivation of cell cultures or performing animal experiments. Loop-mediated isothermal amplification enables rapid pathogen detection with low-cost equipment and little work effort, qualifying the method for on-site application. Within the framework of the project a LAMP assay for detecting HEV in pork products and liver will be developed and validated. For this purpose, suitable genomic target regions will be identified and used for specific primer design. Assay validation includes analytical specificity and sensitivity testing as well as determining the detection limit in artificially contaminated matrices under the influence of product-typical background flora. Finally, the assay will be applied to natively contaminated samples to define the diagnostic quality criteria of the test procedure. In the second phase of the project, pig livers will be examined using the developed LAMP assay and classified into three categories according to viral load. Afterwards, liver sausages will be produced from this material and tested again so that conclusions can be drawn about the significance of the virus load in the raw material and influences of the production process on the viral load in final products.

Funding: Drittmittelprojekt, gefördert durch den Forschungskreis der Ernährungsindustrie e.V. (FEI), 206.756 EUR

Project Details:
Sodium chloride (NaCl) is used for the production of meat products such as raw sausages and cooked sausages, although there are health concerns regarding its use. In addition to techno-functional properties, NaCl not only affects the taste, but also the safety and shelf life of meat products, as NaCl contributes significantly to the hurdle concept by lowering water activity. The use of nitrite, in the form of nitrite curing salt, in meat products not only contributes to colour formation through reddening, flavour formation and antioxidant effects, but also unfolds an antimicrobial effect that leads to the inhibition of pathogenic or toxigenic bacteria such as Listeria (L.) monocytogenes and Clostridium (Cl.) botulinum. However, the consumption of heated meat products made with nitrite/nitrate carries the risk of ingesting nitrosamines, which are classified as carcinogenic. It is so far unclear what effects the individual and combined reductions of NaCl and nitrite really have with regard to shelf life and product safety in the meat products. This has to be considered especially against the background that the manufacturer is responsible for the safety of the product until the end of the best-before date and that food retailers want food with long shelf life. For this reason, in the present project at the Institute for Food Quality and Safety (LMQS), the content of NaCl and nitrite in raw sausages will be reduced, followed by analysis of their physicochemical (e.g. colour, pH value, aw value, shear force) and microbiological (e.g. total bacterial count) properties. The aim is to determine limit values which, when the salts are reduced, still lead to acceptable meat products for the industry. Taking into account the limit values, raw sausages (normal NaCl and nitrite contents, NaCl reduced, nitrite reduced, NaCl and nitrite reduced) will be produced by at least two industry partners in two repeats. After slicing the products will be packed under a protective gas atmosphere. These packages will be stored in the LMQS for up to 84 days, during which time they are regularly analysed physicochemically, microbiologically and, in the event of increased microbial content and/or spoilage, by next-generation sequencing (NGS). The aim is to identify typical (new) bacterial species (indicator germs) that are associated with the shelf life/ spoilage of raw sausages from industrial production. In addition, molecular biological methods for the detection of these indicator germs will also be developed. Finally, challenge tests will be carried out on packaged raw sausages with different NaCl- and nitrite-concentrations after inoculation with the detected indicator germ and Cl. sporogenes, a surrogate of Cl. botulinum. The aim is to determine the behaviour of these bacterial species in or on raw sausages with different NaCl and nitrite contents.

Cooperation Partners:

Deutsches Institut für Lebensmitteltechnik (DIL) in Quakenbrück

Funding: Drittmittelprojekt, gefördert durch die Fritz-Ahrberg-Stiftung., 20.000 EUR

Project Details:
Alternative sources of nitrite or nitrate for meat product production are the subject of much current research. Since nitrite is an important additive that can be used to generate the desired cured red in meat products, and thus an appealing and stable color for the consumer, it is considered largely indispensable. While there are efforts to generate nitrite-free or -reduced products due to health concerns, these are generally characterized by a less vibrant color as well as a shorter shelf life.
Nitrite is commonly added to meat products as a mixture of nitrite ions (sodium or potassium nitrite) and table salt (synthetic nitrite curing salt (NPS)). This is countered by the growing consumer demand for meat products made using natural substances. Plant extracts, for example, which naturally contain nitrate, come into question here. This nitrate can be converted to nitrite in the production process with the aid of a starter culture. The nitrite generated in this way can subsequently induce the curing process.
In addition to plant extracts, drinking water can also be used as a source of nitrite or nitrate. If drinking water is treated with non-thermal plasma, nitrogen species (including nitrate and nitrite) are formed in the liquid. The amounts and compositions of these nitrogenous species vary depending on the plasma source, settings and treatment durations. Thanks to the kind support of the Fritz Ahrberg Foundation, we were able to purchase a plasma source in early 2021 and use it to produce plasma-activated water (PAW) for the first time. The first results showed that both nitrite and nitrate can be generated in, for a curing process, sufficient quantities. The plant available to us generates mainly nitrate ions. These could be successfully converted into nitrite by adding a nitrate-reducing starter culture in an in vitro experiment for the production of a cooked sausage product. Thus, a curing process using PAW could be successfully induced.
In addition to the direct incorporation of PAW into the browning substance in the production of cooked sausage, the use of this novel nitrate or nitrite source is also of interest for the wet curing of meat products. This research project therefore aims to gather initial knowledge on whether PAW can induce a reddening process without the addition of synthetic nitrite during the wet curing of meat products and what criteria must be met to generate an acceptable product. Possible other positive or negative effects on the product and its shelf life will be investigated and critically discussed. Physicochemical, sensory and microbiological investigations are planned for this purpose.

Project Details:
The project "Phages in small animal medicine" is a cooperative project of the Clinic for Small Animals, the Institute for Pharmacology, Toxicology and Pharmacy, the Institute for Food Quality and Food Safety/Center for Translational Studies, the Institute for Microbiology and the Institute for Pathology. The project aims at gaining new insights into the effectiveness of bacteriophages (phages) that specifically infect Staphylococcus (S.) pseudintermedius, ESBL-producing E. coli, Acinetobacter baumanii and Pseudomonas aeruginosa as well as multi-resistant enterococci. The use of specific bacteriophages will be tested in ex-vivo models.

Funding: Milchwirtschaft Niedersachsen e.V. (LVN), 30.000 EUR

Project Details:
Klinische und subklinische Mastitiden führen zu Einbußen in der Qualität und Wirtschaftlichkeit der Milchwirtschaft. Häufig werden Staphylococcus aureus (S. aureus) und Streptococcus
uberis (S. uberis) als Erreger nachgewiesen, durch die Antibiogrammpflicht neuerdings vermehrt auch multiresistente Escherichia coli (E. coli). Der Einsatz von Antibiotika soll in
Hinblick auf die mögliche Verbreitung resistenter und ultiresistenter Erreger so weit wie möglich gesenkt werden. Es wird daher dringend nach alternativen Behandlungsmethoden
mit einer hohen antibakteriellen Wirksamkeit gesucht.
Die Ziele des Projektes sind:
a) Isolierung und Charakterisierung geeigneter Phagen
b) Auswahl von Phagen mit hoher Wirksamkeit gegenüber klinischen
Bakterienisolaten aus der Milchviehhaltung
c) Langfristig soll eine Erhöhung der Wirtschaftlichkeit der Milchviehhaltung dadurch erreicht werden, dass innovative und naturnahe Therapien ohne Wartezeiten entwickelt werden, die die Lieferfähigkeit der Milch nicht beeinträchtigen.
d) Zusätzlich wird mit dem Einsatz naturnaher Alternativen zur Antibiotikatherapie sowie der Verbesserung des Tierschutzes durch wirksame Behandlungsstrategien, dem Wunsch des Verbrauchers nach natürlichen Lebensmitteln Rechnung getragen. Damit liefert dieses Projekt durch Reduktion des Antibiotikaeinsatzes in der Milchproduktion neben der Verbesserung des Tierschutzes auch einen Beitrag zum gesundheitlichen Verbraucherschutz.

Funding: Umweltbundesamt, (Geschäftszeichen: 25 105/0386, Projektnummer: 3721252010) Fachbegleitung: Ulrike Pirntke, UBA, 199.989 EUR

Project Details:
The aim of the project is to develop a monitoring and assessment concept for the pollutant load of marine mammals in the North and Baltic Seas. The work thus also contributes to the implementation of the requirements for descriptor 8 (pollutants) of the Marine Strategy Framework Directive (MSFD).
Within the scope of the contract, the Institute for Terrestrial and Aquatic Wildlife Research (ITAW) of the University of Veterinary Medicine Hannover (TiHo) Foundation will evaluate the current state of knowledge on pollutant loads and health effects for harbor porpoise (Phocoena phocoena), grey seal (Halichoerus grypus) and harbor seal (Phoca vitulina) from the North and Baltic Seas using existing publications, reports and data sets. For this purpose, studies from the North Sea and the Baltic Sea as well as from other marine areas will be used. Furthermore, a monitoring and assessment concept for the pollution load of marine mammals under the MSFD, the Convention for the Protection of the Marine Environment of the Baltic Sea (HELCOM) and the Convention for the Protection of the Marine Environment of the North-East Atlantic (OSPAR) will be developed. The utilization of the determined pollutant data in marine mammals for the chemical legislation, e.g. REACH, Plant Protection Act will be ensured together with UBA.
In order to be able to assess the pollutant load, assessment thresholds for selected pollutants for the protection of marine mammals will be developed together with the Helmholtz Centre for Environmental Research GmbH (UFZ): environmental quality standards (EQS) will be derived for the selected pollutants, following the methodology of the EU Technical Guidance Document (TGD) No. 27, in order to comply with the Water Framework Directive (WFD), the MSFD and the regional conventions OSPAR as well as HELCOM in approach and level of protection. The aim is that the marine mammal EQS to be developed will support the implementation of descriptor 8 (pollutants) and indicator development at OSPAR as well as HELCOM for a (regional) assessment of marine mammal pollutant loads.

Results:

Abschlußbericht: Entwicklung eines Monitoring- und Bewertungskonzeptes für die Schadstoffbelastung mariner Säuger in der Nord- und Ostsee zur Umsetzung der MSRL

https://www.umweltbundesamt.de/publikationen/entwicklung-eines-monitoring-bewertungskonzeptes

Cooperation Partners:

Prof. Dr. Annika Jahnke, Helmholtz-Zentrum für Umweltforschung GmbH - UFZ

Funding: Bundesministerium für Bildung und Forschung (BMBF)/PTJ Jülich, 197.600 EUR

Project Details:
The North and Baltic Seas are currently undergoing increasing change due to human activities and climate change. The aim of the subproject of the University of Veterinary Medicine Hannover Foundation, conducted by the Institute of Terrestrial and Aquatic Wildlife Research, is to identify and establish pathogens in native marine mammals and in the environment as indicators of increasing anthropogenic pressures on marine mammals. Habitat changes and effects of anthropogenic activities on marine mammals could be detected at an early stage and serve the development of management recommendations and political and societal decision-making processes with regard to the protection and sustainable use of coastal and marine areas. For this purpose, existing data from previous projects on marine mammals from the planned observatories' areas will be compiled. In addition, new data will be obtained during the project from live and dead grey seals (Halichoerus grypus), harbor seals (Phoca vitulina), harbor porpoises (Phocoena phocoena) and taken from the environment at the selected observatories/sampling stations (real laboratories), which include Borkum Riffgrund, Sylt Outer Reef and Eckernförde Bay. The swab, tissue and water samples are analyzed for the bacteria and selected viruses present using various modern methods. The loads are recorded both qualitatively and quantitatively. The data obtained will be used to assess whether there have been changes in the loads at the three sites over the past 25 years. In addition, the data will be analyzed with respect to pathogens with indicator suitability, and appropriate pathogens will be integrated into the long-term monitoring strategy of the reallaboratories. This integrated research on marine mammals, together with the results of the other project partners, forms an overall picture. This research will make an important contribution to the sustainable use and protection of the coasts and seas, as well as their inhabitants, and thus to the conservation of biodiversity.

Cooperation Partners:

Alfred-Wegener-Institut Helmholtz-Zentrum für Polar- und Meeresforschung, Bremerhaven inklusive Helmholtz-Institut für Funktionelle Marine Biodiversität an der Universität Oldenburg

Christian-Albrechts-Universität, Kiel

Deutsches Institut für Entwicklungspolitik, Bonn

GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel

Humboldt-Universität zu Berlin

Leibniz-Institut für Ostseeforschung Warnemünde

Max-Planck-Institut für Marine Mikrobiologie, Bremen

Senckenberg am Meer, Wilhelmshaven

Johann Heinrich von Thünen-Institut, Bremerhaven

Umweltforschungszentrum Leipzig

Universität Greifswald

Universität Oldenburg

Rostock Universität Rostock

Leibniz-Zentrum f. Mar. Tropenforschung Bremen