Overview of research projects

Funding: Europäische Union, Europäischer Landwirtschaftsfonds für die Entwicklung des ländlichen Raums - ELER, 179.500 EUR

Project Details:
Abstract:
The consequences of climate change are reflected in rising temperatures and, at the same time, more frequent extreme weather conditions. This has direct consequences for agriculture. Long-term high temperatures not only put a strain on people, but also on farm animals. Against the background of the predicted longer periods of heat in the coming summers, an adapted climate management for all barn and husbandry types is one of the central adaptation tasks in the course of climate change.
At the same time, farms face the challenge of reducing ammonia emissions. This not only aims at improving the nitrogen utilization and thus at resource-saving and efficient fertilization, but also in particular at the pollution of the environment through N-deposits from the air (over-fertilization and acidification) and human health through secondary dusts that accumulate can form from ammonia.
In addition, the responsibility of the animal owner for the well-being of his animals is at the center of the social discourse on the future of the agricultural and food industry. In animal and barn management, care must be taken to ensure that optimal husbandry and feeding conditions prevail in order to prevent diseases.
In order to meet these challenges at the same time, the aim of "Mee(h)r im Stall" is to test an integrative climate system that reduces the challenges and fields of action outlined for agricultural operations
1. Of temperature peaks in the course of climate change in livestock stalls
2. Ammonia levels in the stable air
3. Fine dust levels in the stable room and
4. the germ pressure
equally and successfully addressed via an air conditioning application in poultry fattening houses.

So far, there has been no system in livestock husbandry that takes all of the challenges outlined into account at the same time. In "Mee(h)r im Stall" an integrative air conditioning system is used, which connects two technical systems that are already used effectively in other economic contexts (e.g. slaughter, food processing, beverage and pharmaceutical industry, hospital) by means of "intelligent" switching and control technology and thus addresses the four outlined fields of action for poultry farmers in a needs-oriented manner and at the same time focuses on the working conditions for workers in the barn.
On the one hand, a hydrogen peroxide (H2O2) nebulization system is used. To date, H2O2 nebulization has mainly been used for disinfection purposes. An ionization process is also used to simultaneously optimize the air quality for animals and people in the barn. The functional principle is very simple: negative and positive ions are generated by the so-called bipolar ionization. These ions convert the oxygen into reactive oxygen species (ROS) such as superoxides, peroxides and hydroxyls. These electrically charged ions have the property of binding to microparticles in the air and thus clean the air of dust and harmful substances such as mold, viruses, bacteria and allergens. Regardless of the processes mentioned above, one has the subjective feeling of perceiving a sea breeze in the barn. More sea in the stable!

Link:
https://www.uni-vechta.de/meehr-im-stall

Cooperation Partners:

Trafo:agrar

AKE ZentriJet GmbH

Geflügelbetriebe Mahlstedt und Kühter

Funding: Biotech Sector, 151.800 EUR

Project Details:
Therapy development

Funding: DFG (VIPER GRK)

Project Details:
The aim of the project was to identify mechanisms of immune interference of canine distemper virus (CDV) in cells of innate immunity, in particular with regard to the antagonization of the innate antiviral immune response. For this purpose, different primary cell cultures were created from canine isolated immune cells and infected with different strains of CDV. The focus of the work was on alveolar macrophages, as these cells play a crucial role as primary target cells of the virus after aerogenic CDV infection and are furthermore essential for the maintenance of alveolar homeostasis. Differences in the response of immune cells to CDV infection were investigated using immunofluorescence staining, RT-qPCR, virus titration, RNA sequencing and assays to quantify cell death and viability.

Results:

https://pubmed.ncbi.nlm.nih.gov/39796262/

Cooperation Partners:

Helmholtz-Zentrum für Infektionsforschung, Genomanalytik (Robert Geffers)

Funding: DFG (VIPER GRK)

Project Details:
The exact pathomechanisms that lead to the development of long-term consequences after an acute SARS-CoV-2 infection - also known as long-COVID - are still largely unknown. Since only limited sample material from surviving patients with long-COVID is available, the use of a suitable animal model is essential to investigate the underlying mechanisms. In this project, the Syrian golden hamster was established as a model animal to study the pathogenesis of long-COVID. Initially, a short-term study was conducted to investigate the alveolar regeneration mechanisms, in which a morphological homology to the processes in the human lung after s SARS-CoV-2 infection was found. In a further long-term study over four months, morphological, molecular biological and lung function analyses were combined. The course of the disease in the animals showed three phases: acute, subacute and chronic. While the acute phase was characterized by severe breathing restrictions, these only occurred after exercise in the later phases and disappeared entirely after about 6 weeks. Histologically, there was persistent fibrosis and alveolar bronchiolization with club cell proliferation. Transcriptome analysis showed, among other things, an upregulation of pro-fibrotic genes. In the future, long-term consequences in the brain will be investigated primarily by transcriptome analysis, and the role of the pulmonary neuroendocrine system, which is connected to the central nervous system via afferent nerve fibers, will be examined in more detail.

Results:

Paper 1: https://www.nature.com/articles/s41467-023-39049-5 ; Nature Communications, 2023

 

Paper 2: https://www.researchsquare.com/article/rs-4681343/v1 ; (preprint Version), accepted at Nature Communications, 2025

Funding: EU, 120.000 EUR

Project Details:
The project is carried out at DIL e.V., Quakenbrück.
The Horizon Europe project ZeroW directly addresses the challenge of food loss and waste by developing and testing an interplay of innovations under real-world conditions. 46 partners from across Europe have joined forces to develop realistic solutions to significantly reduce food waste and accelerate a just transition to a socially, economically and environmentally sustainable food system for all. The DIL is partner of the Living Lab "Mobile food valorisation as a service".

Cooperation Partners:

Inlecom Innovation Astiki Mi Kerdoskopiki Etaireia,

Wageningen University,

Nederlandse Organisatie Voor Toegepast Natuurwetenschappelijk Onderzoek Tno,

South East Technological University,

Biosense Institute - Research and Development Institute for Information Technologies in Biosystems,

Digiotouch Ou,

Eigen Vermogen Van Het Instituut

Voor Landbouw- En Visserijonderzoek,

Safe Food Advocacy Europe,

FBCD AS,

VLTN BV,

Instituto Tecnologico De Aragon,

Konnecta Systems Ltd.,

ITC - Inovacijsko Tehnoloski Grozd Murska Sobota,

Fondazione Istituto Sui Trasporti E La Logistica,

Instituto Tecnologico Del Embalaje,

Transporte Y Logistica,

Asociatia Transilvania It,

Asociatia Clusterul Agro-Food-Ind

Napoca,

Fundacion Corporacion Tecnologica De Andalucia,

Instituto Andaluz De Investigaciony Formacion Agraria Pesquera Alimentaria Y De La Produccion Ecologica,

Agrifood Lithuania Dih,

Sintef As,

Tilburg University,

Novamont Spa,

Mc Shared Services Sa,

Modelo Continente Hipermercados S.A.,

Grupo Empresarial La Cana,

Multiscan Technologies Sl, UAB Art21,

Lietuvos Darzoviu Augintoju Asociacija,

Lietuvos Maisto Eksportuotoju Asociacija (Litmea),

F6S Network Ireland Limited,

F6S Network Ltd.,

Allmicroalgae Natural Products Sa,

Universidade Do Minho,

Erevnitiko Panepistimiako Institouto Systimaton Epikoinonion Kai Ypologiston,

Boerenbond Projecten, Openbare Vlaamse Afvalstoffenmaatschappij,

ICLEI European Secretariat GmbH,

Kmetijsko Gozdarska Zbornica Slovenije Kmetijsko Gozdarski Zavod Murska Sobota, Univerza V Mariboru,

Robin Food,

Asociacion De Investigacion De Industrias Carnicas Del Principado De Asturias,

Aves Nobles Y Derivados,

S.L.,

Termoformas De Levante Sl, Eroski Scoop,

Voedselbank Limburg,

SVZ International Bv,

Konnecta Systems Ike,

Federation Belge Des Banques Alimentaires

Funding: EIP, EU, Landwirtschaftskammer Niedersachsen, 256.193 EUR

Project Details:
The project is carried out on DIL e.V., Quakenbrück.
This project aims to pilot a sustainable, resource-efficient technology for converting plant by-products near agricultural operations into valuable components, particularly protein-rich algae biomass, and to integrate it into daily routines. The project involves processing by-products from vegetable production through hydrolysis and utilizing the hydrolysate as a nutrient source for heterogeneous microalgae. The product of the process is a protein-rich algae biomass that the farmer involved can use as animal feed for pig fattening. In addition to piloting the process on-site and integrating it into daily operations, the project focuses on building new value chains and activating a circular economy in the farms, generating new sales channels and additional income. Current results include a ready-to-use prototype for microalgae production and its environmental impacts. The environmental impact of cultivating the microalgae biomass is currently under study, along with optimizing the process and necessary protocols.

Cooperation Partners:

Institut für Lebensmittel- und Umweltforschung e.V. (ILU);

Schroeder Winkelmann GbR

Funding: Bundesanstalt für Landwirtschaft und Ernährung (BLE), 554.060 EUR

Project Details:
Bacterial diarrhoeal diseases in pigs are of great economic importance, affect animal welfare in all age groups and contribute significantly to the use of antibiotics in pig. Of the seven Brachyspira species found in pigs, most diarrhoeal diseases are triggered by the species Brachyspira hyodsenteriae (BHY) and Brachyspira pilosicoli (BPI). Treatment of diarrhoea caused by brachyspiral infections is very time-consuming and only a small number of microbial agents are approved for treatment. The significance of differences in the pathogenic potential of different bacterial isolates and the influence of the genetic background of the pig is still unknown. Therefore, a reassessment of the brachyspirial infection to improve the animal welfare and reduce the use of antibiotics is needed. Consequently, the aim of the present project is to understand the pathogenesis of Brachyspira using our established in vitro intestinal organoid model. In addition, the influence of different Brachyspira species and the influence of different genetic backgrounds of the pigs will be investigated.

Funding: BLE, 812.500 EUR

Project Details:
Pig diseases and injuries occur in all housing systems. Intensive care or treatment does not always result in healing so that animals have to be killed to avoid further pain or suffering. The Animal Protection Act fundamentally stipulates the protection of animal lives and well-being. In the case of serious diseases or injuries, the deci-sion which subject of protection needs to be preferred is inevitable. For pig farmers, the decision concerning killing an animal is considerably challenging. The aim of this project is to define simply collectable and valid criteria with which the well-being of diseased pigs can be accurately assessed and a responsible, justified decision can be made regarding the killing. The criteria should define the earliest possible time-point in the course of a disease at which an impairment of the well-being for protecting life is no longer acceptable and emergency killing becomes inevitable. The decision regarding the killing requires in addition an ethical evaluation, which includes safeguarding interests of the pig owners. The project should depict the complex process of decision-making concerning the killing of diseased pigs exem-plary for relevant diseases or injuries. Diseased or injured pigs of various age groups should be monitored during the entire course of disease by means of clinical exam-inations and supplementary photo and video documentation in order to generate data sets, which make a decision regarding the killing understandable. Finally, prac-ticable, illness-/injury-specific criteria catalogues should be compiled for livestock pigs and integrated in a training concept. A further aim of the project is to analyse the reasons why pig farmers have wrongly assessed the health status of affected animals. The training concept should therefore directly deal with these reasons.

Cooperation Partners:

ISN Projekt GmbH, Damme

Funding: DFG-Deutsche Forschungsgemeinschaft, 210.700 EUR

Project Details:
Marine mammals are infected by a variety of endo- and ectoparasites which face multiple challenges when having to attach to their host. Arthropod parasites of marine mammals have developed specialized anatomical adaptations, to secure their hold on aquatic hosts, and sophisticated strategies, to enable transmission between vagile pelagic and amphibious wildlife. We have chosen three arthropod species that have adapted differently to their marine hosts: seal lice, as hematophagous insects of terrestrial origin and whale lice, as amphipod crustaceans of marine origin, as well as respiratory mites from the airways of seals. All three species have motile larvae that are transmitted during bodily contact of host individuals. Their exoskeleton has evolved by adapting materials and design to survive on gregarious and diving marine mammals. Little is known about biology of marine mammal arthropod parasites, but even less about physical aspects of their life in this challenging environment. Novel approaches are required to provide more insight in structural design and mechanical properties and knowledge on physical principles of their attachment and locomotion. State of the art instrumentation, such as micro-CT, confocal laser scanning microscopy and Cryo-SEM will provide basic knowledge on morphological adaptations of parasites that enable their attachment to hosts during dives, haul-out and how they endure currents and social interactions. The locomotive abilities of the different life cycle stages on various surfaces and developed features of insect, crustacean and arachnid species are compared to understand functional morphology of their locomotory system. Parasites reduce the fitness of their host most obviously at the interface between parasite and host. Whale lice impede healing processes of skin wounds and seal lice are vectors for filarial and viral diseases. We will investigate the host-parasite interface using histopathology of infected tissues to define the structural damage to host tissues. Friction and adhesion forces maintained by the different parasite species are investigated by custom made microforce testing devices. The envisaged project will provide knowledge on relationships between structure, material properties and attachment performance of attachment devices in selected arthropod parasite species. Data on their locomotion and recruitment dynamics will be studied for the first time and the results will provide new avenues for development of biologically-inspired surfaces and systems specialized for enhancement or reduction of frictional or adhesive forces. New data on the properties of attachment devices in different ontogenetic stages and their role in the life cycle can potentially reveal interesting veterinary aspects.

Funding: DFG, 240.000 EUR

Project Details:
Wild animals can serve as reservoir for causative agents of important livestock diseases including African and Classical swine fever, Foot and mouth disease, Bluetongue as well as for zoonotic viruses like SARS coronaviruses, Rabies virus, and Hepatitis E virus. In recent years, a growing number of emerging viruses were identified in domestic and wild animals. These include novel bunyaviruses, reoviruses, astroviruses, birnaviruses, circoviruses and parvoviruses from wild boar detected during the first funding period of VIPER. Another example is the identification of pestiviruses from non-ungulate hosts including rodents, bats, pangolin, and a whale. Further characterization of these newly identified viruses, including studies on viral replication, innate immune responses and other virus-host interactions, depends on successful virus isolation and propagation in tissue culture cells. Preliminary work revealed that the whale pestivirus can efficiently infect swine kidney cells and viral antigen is detectable by a monoclonal antibody. However, for several other viruses virus isolation was not successful. The recent establishment of airway and intestinal epithelial cells organoid cultures from pigs and cattle at our institute can be very useful for isolation and subsequent characterization of selected novel viruses. It is expected that the results of this project will enhance our understanding of viral evolution, origin, cross species transmission and virus-host interactions of human and animal viruses, and thus improve outbreak preparedness and infectious disease control.

Results:

https://www.mdpi.com/1999-4915/17/1/107